Model for Nature Policy
Gebruikershandleiding
Introductie
Veranderingen tov. MNP 6.0
Installatie
MNP Gebruiken
Data specificaties
Overzicht van MNP soorten
Voor ontwikkelaars
mnp
Model for Nature Policy
Index
Index
A
|
B
|
C
|
D
|
E
|
F
|
G
|
H
|
I
|
K
|
L
|
M
|
N
|
O
|
P
|
Q
|
R
|
S
|
T
|
U
|
V
|
W
|
Y
A
add_dynamics_to_config() (in module mnp.utils)
add_output_to_subselection() (in module mnp.evaluation.subselection_output)
add_to_table_data() (mnp.evaluation.subselection_output.DetailedTable method)
aggregate() (mnp.preparation.aggregate_land_type_map.LandTypeMap method)
aggregate_land_type_map() (in module mnp.preparation.aggregate_land_type_map)
aggregate_multiprocess() (mnp.preparation.aggregate_land_type_map.LandTypeMap method)
aggregate_row() (in module mnp.preparation.aggregate_land_type_map)
any2any() (mnp.preparation.species_database.SpeciesDataBase method)
AssignedSpeciesMap (class in mnp.evaluation.subselection_output)
B
BiggestBottleneckMap (class in mnp.evaluation.subselection_output)
bold_red (mnp.utils.CustomFormatter attribute)
bottleneck_analysis() (in module mnp.MNP)
build_template() (mnp.species_models.polygon_habitat_maps.PolygonHabitatMap method)
C
calculate() (mnp.species_models.environmental_factor.EnvironmentalFactor method)
(mnp.species_models.habitat_suitability.HSI method)
(mnp.species_models.species_evaluation.SpeciesEvaluation method)
clear_temp() (in module mnp.utils)
Clustering (class in mnp.species_models.clustering)
ClusteringProcedure (class in mnp.species_models.clustering)
ClusterLocal (class in mnp.species_models.clustering)
complying_species (mnp.config.MNPParameters attribute)
config (mnp.config.MNPParameters attribute)
config_info_to_temp() (in module mnp.utils)
config_section_to_cover() (in module mnp.utils)
content (mnp.evaluation.subselection_output.AssignedSpeciesMap attribute)
(mnp.evaluation.subselection_output.HotSpotsMap attribute)
(mnp.evaluation.subselection_output.KeyPopulationsCountMap attribute)
copy_input_file() (in module mnp.utils)
create() (mnp.evaluation.subselection_output.AssignedSpeciesMap method)
(mnp.evaluation.subselection_output.BiggestBottleneckMap method)
(mnp.evaluation.subselection_output.DetailedTable method)
(mnp.evaluation.subselection_output.EnvironmentalBottleneckMap method)
(mnp.evaluation.subselection_output.EnvironmentalFactorHotspotMap method)
(mnp.evaluation.subselection_output.HotSpotsMap method)
(mnp.evaluation.subselection_output.KeyPopulationsCountMap method)
(mnp.evaluation.subselection_output.LandTypeMap method)
(mnp.evaluation.subselection_output.QGisLayers method)
(mnp.evaluation.subselection_output.RegionalContributionTable method)
(mnp.evaluation.subselection_output.SubselectionMap method)
(mnp.evaluation.subselection_output.SubselectionOutput method)
(mnp.evaluation.subselection_output.SummaryTable method)
(mnp.evaluation.subselection_output.Table method)
create_directories() (in module mnp.utils)
create_output() (in module mnp.evaluation.subselection_evaluation)
csv_is_readable() (in module mnp.preparation.input_verification_functions)
CustomFormatter (class in mnp.utils)
cyan (mnp.utils.CustomFormatter attribute)
D
DetailedTable (class in mnp.evaluation.subselection_output)
directory_contains() (in module mnp.preparation.input_verification_functions)
E
environmental_factor_hotspot_statistic (mnp.config.MNPParameters attribute)
environmental_response_tables (mnp.config.MNPParameters attribute)
EnvironmentalBottleneckMap (class in mnp.evaluation.subselection_output)
EnvironmentalFactor (class in mnp.species_models.environmental_factor)
EnvironmentalFactorHotspotMap (class in mnp.evaluation.subselection_output)
EnvironmentalFactorTemplate (class in mnp.evaluation.qgis_templates)
error() (mnp.species_models.species_geo_map.SpeciesGeomapLogger method)
ErrorMessage (class in mnp.preparation.io_pathways)
evaluate_metapopulations() (mnp.species_models.species_evaluation.SpeciesEvaluation method)
evaluate_models() (in module mnp.MNP)
evaluation_results() (mnp.species_models.species_model.SpeciesModel method)
F
file_exists() (mnp.species_models.species_geo_map.SpeciesGeoMap method)
filter_incomplete_cells() (in module mnp.preparation.filter_incomplete_cells)
find_replace() (mnp.evaluation.qgis_templates.QgisLayerTemplate method)
folders (mnp.config.MNPParameters attribute)
force_species_model_recalculation (mnp.config.MNPParameters attribute)
format() (mnp.utils.CustomFormatter method)
FORMATS (mnp.utils.CustomFormatter attribute)
from_configparser() (mnp.config.MNPParameters class method)
funcname (mnp.utils.CustomFormatter attribute)
G
geo_profile_from_hsi() (in module mnp.utils)
geospatial_profile (mnp.config.MNPParameters attribute)
get_complying_species() (mnp.config.MNPParameters method)
get_land_type_color() (in module mnp.evaluation.qgis_templates)
get_logger() (in module mnp.utils)
get_populations_array() (mnp.species_models.species_model.SpeciesModel method)
get_valid_species() (in module mnp.preparation.select_valid_species)
get_valid_species_selections() (in module mnp.preparation.select_valid_species)
(mnp.config.MNPParameters method)
grey (mnp.utils.CustomFormatter attribute)
group_traits (mnp.config.MNPParameters attribute)
H
HotSpotsMap (class in mnp.evaluation.subselection_output)
HSI (class in mnp.species_models.habitat_suitability)
hsi_threshold (mnp.config.MNPParameters attribute)
HSIProcedure (class in mnp.species_models.habitat_suitability)
HSITemplate (class in mnp.evaluation.qgis_templates)
I
identify() (mnp.preparation.io_pathways.InputPathway method)
identify_land_types_per_species() (in module mnp.evaluation.subselection_output)
info() (mnp.species_models.species_geo_map.SpeciesGeomapLogger method)
InputPathway (class in mnp.preparation.io_pathways)
is_directory() (in module mnp.preparation.input_verification_functions)
is_geospatial_raster() (in module mnp.preparation.input_verification_functions)
is_species() (mnp.preparation.species_database.SpeciesDataBase method)
is_valid_csv() (in module mnp.preparation.input_verification_functions)
K
key_population_area (mnp.species_models.species_evaluation.SpeciesEvaluationParameters attribute)
KeyPopulationsCountMap (class in mnp.evaluation.subselection_output)
L
land_type_suitabilities (mnp.config.MNPParameters attribute)
LandTypeMap (class in mnp.evaluation.subselection_output)
(class in mnp.preparation.aggregate_land_type_map)
LandTypeMapTemplate (class in mnp.evaluation.qgis_templates)
levelname (mnp.utils.CustomFormatter attribute)
List (class in mnp.utils)
list_sources_destinations() (in module mnp.utils)
log_file_to_cover() (in module mnp.utils)
log_messages() (mnp.preparation.io_pathways.InputPathway method)
(mnp.species_models.species_model.SpeciesModel method)
log_start_completed() (in module mnp.utils)
M
make_bottleneck_map() (in module mnp.evaluation.subselection_output)
make_geospatial_profile() (mnp.preparation.aggregate_land_type_map.LandTypeMap method)
melt_boolean_dataframe() (in module mnp.preparation.select_valid_species)
message (mnp.utils.CustomFormatter attribute)
mnp
module
mnp() (in module mnp.MNP)
mnp.config
module
mnp.evaluation
module
mnp.evaluation.qgis_templates
module
mnp.evaluation.subselection_evaluation
module
mnp.evaluation.subselection_output
module
mnp.MNP
module
mnp.preparation
module
mnp.preparation.aggregate_land_type_map
module
mnp.preparation.filter_incomplete_cells
module
mnp.preparation.input_verification_functions
module
mnp.preparation.io_pathways
module
mnp.preparation.read_rasters_from_cover
module
mnp.preparation.select_valid_species
module
mnp.preparation.species_database
module
mnp.preparation.verify_spatial_data_coverage
module
mnp.species_models
module
mnp.species_models.clustering
module
mnp.species_models.environmental_factor
module
mnp.species_models.habitat_suitability
module
mnp.species_models.polygon_habitat_maps
module
mnp.species_models.species_evaluation
module
mnp.species_models.species_geo_map
module
mnp.species_models.species_model
module
mnp.species_models.species_specific_maps
module
mnp.utils
module
MNPParameters (class in mnp.config)
module
mnp
mnp.config
mnp.evaluation
mnp.evaluation.qgis_templates
mnp.evaluation.subselection_evaluation
mnp.evaluation.subselection_output
mnp.MNP
mnp.preparation
mnp.preparation.aggregate_land_type_map
mnp.preparation.filter_incomplete_cells
mnp.preparation.input_verification_functions
mnp.preparation.io_pathways
mnp.preparation.read_rasters_from_cover
mnp.preparation.select_valid_species
mnp.preparation.species_database
mnp.preparation.verify_spatial_data_coverage
mnp.species_models
mnp.species_models.clustering
mnp.species_models.environmental_factor
mnp.species_models.habitat_suitability
mnp.species_models.polygon_habitat_maps
mnp.species_models.species_evaluation
mnp.species_models.species_geo_map
mnp.species_models.species_model
mnp.species_models.species_specific_maps
mnp.utils
N
name (mnp.evaluation.subselection_output.RegionalContributionTable attribute)
(mnp.evaluation.subselection_output.SummaryTable attribute)
name_info() (mnp.species_models.species_model.SpeciesModel method)
Nature (class in mnp.species_models.habitat_suitability)
O
occurs_in_formula() (in module mnp.preparation.input_verification_functions)
OutputPathway (class in mnp.preparation.io_pathways)
P
path_exists() (in module mnp.preparation.input_verification_functions)
PolygonHabitatMap (class in mnp.species_models.polygon_habitat_maps)
population_array() (mnp.species_models.species_evaluation.SpeciesEvaluation method)
PopulationMapTemplate (class in mnp.evaluation.qgis_templates)
possibly_viable_threshold (mnp.species_models.species_evaluation.SpeciesEvaluationParameters attribute)
PreCalculated (class in mnp.species_models.habitat_suitability)
prepare_input() (in module mnp.MNP)
produce_nkeys_map() (in module mnp.species_models.species_specific_maps)
produce_nkeys_maps() (in module mnp.species_models.species_specific_maps)
pxl_area (mnp.config.MNPParameters attribute)
(mnp.species_models.species_evaluation.SpeciesEvaluationParameters attribute)
Q
QGisLayers (class in mnp.evaluation.subselection_output)
QgisLayerTemplate (class in mnp.evaluation.qgis_templates)
R
rand_web_color_hex() (in module mnp.evaluation.qgis_templates)
raster_has_resolution() (in module mnp.preparation.input_verification_functions)
rasters_have_identical_bounds() (in module mnp.preparation.input_verification_functions)
read_aggregated_map() (in module mnp.preparation.aggregate_land_type_map)
read_from_file() (mnp.species_models.species_geo_map.SpeciesGeoMap method)
read_geospatial_profile() (mnp.config.MNPParameters method)
read_rasters_from_cover() (in module mnp.preparation.read_rasters_from_cover)
read_template_lines() (mnp.evaluation.qgis_templates.QgisLayerTemplate method)
red (mnp.utils.CustomFormatter attribute)
region_evaluation_results() (mnp.species_models.species_model.SpeciesModel method)
region_names (mnp.config.MNPParameters attribute)
RegionalContributionTable (class in mnp.evaluation.subselection_output)
RegionalSpeciesEvaluation (class in mnp.species_models.species_evaluation)
reset (mnp.utils.CustomFormatter attribute)
response_020 (mnp.config.MNPParameters attribute)
response_080 (mnp.config.MNPParameters attribute)
response_100 (mnp.config.MNPParameters attribute)
results() (mnp.species_models.species_evaluation.SpeciesEvaluation method)
run() (mnp.species_models.clustering.ClusteringProcedure method)
(mnp.species_models.clustering.ClusterLocal method)
(mnp.species_models.habitat_suitability.HSIProcedure method)
(mnp.species_models.habitat_suitability.Nature method)
(mnp.species_models.habitat_suitability.PreCalculated method)
run_and_evaluate() (in module mnp.MNP)
run_clustering() (mnp.species_models.species_model.SpeciesModel method)
run_evaluation() (mnp.species_models.species_model.SpeciesModel method)
run_hsi() (mnp.species_models.species_model.SpeciesModel method)
run_regional_evaluation() (mnp.species_models.species_model.SpeciesModel method)
run_species() (in module mnp.species_models.species_model)
run_species_models() (in module mnp.species_models.species_model)
S
save() (mnp.preparation.aggregate_land_type_map.LandTypeMap method)
save_config_and_log() (in module mnp.MNP)
save_environmental_factor_raster() (mnp.species_models.habitat_suitability.HSI method)
save_geospatial_profile() (mnp.preparation.aggregate_land_type_map.LandTypeMap method)
save_qlr() (mnp.evaluation.subselection_output.LandTypeMap method)
save_qml() (mnp.evaluation.subselection_output.BiggestBottleneckMap method)
(mnp.evaluation.subselection_output.EnvironmentalFactorHotspotMap method)
(mnp.evaluation.subselection_output.HotSpotsMap method)
save_raster() (mnp.species_models.species_geo_map.SpeciesGeoMap method)
save_rasters (mnp.config.MNPParameters attribute)
save_spatial_mask() (in module mnp.preparation.verify_spatial_data_coverage)
slugify() (in module mnp.utils)
small_pop_slope (mnp.config.MNPParameters attribute)
(mnp.species_models.species_evaluation.SpeciesEvaluationParameters attribute)
small_pop_threshold_area (mnp.config.MNPParameters attribute)
(mnp.species_models.species_evaluation.SpeciesEvaluationParameters attribute)
species_names (mnp.config.MNPParameters attribute)
species_traits (mnp.config.MNPParameters attribute)
SpeciesDataBase (class in mnp.preparation.species_database)
SpeciesEvaluation (class in mnp.species_models.species_evaluation)
SpeciesEvaluationParameters (class in mnp.species_models.species_evaluation)
SpeciesGeoMap (class in mnp.species_models.species_geo_map)
SpeciesGeomapLogger (class in mnp.species_models.species_geo_map)
SpeciesModel (class in mnp.species_models.species_model)
SubRegion (class in mnp.species_models.species_evaluation)
subselection_tables (mnp.config.MNPParameters attribute)
SubselectionEvaluation (class in mnp.evaluation.subselection_evaluation)
SubselectionMap (class in mnp.evaluation.subselection_output)
SubselectionOutput (class in mnp.evaluation.subselection_output)
summary_table_to_file() (mnp.species_models.species_evaluation.SpeciesEvaluation method)
SummaryTable (class in mnp.evaluation.subselection_output)
T
Table (class in mnp.evaluation.subselection_output)
time (mnp.utils.CustomFormatter attribute)
to_file() (mnp.evaluation.subselection_output.AssignedSpeciesMap method)
(mnp.evaluation.subselection_output.BiggestBottleneckMap method)
(mnp.evaluation.subselection_output.EnvironmentalFactorHotspotMap method)
(mnp.evaluation.subselection_output.HotSpotsMap method)
(mnp.evaluation.subselection_output.LandTypeMap method)
(mnp.evaluation.subselection_output.QGisLayers method)
(mnp.evaluation.subselection_output.SubselectionMap method)
(mnp.evaluation.subselection_output.SubselectionOutput method)
(mnp.evaluation.subselection_output.Table method)
trait_info() (mnp.species_models.species_evaluation.SpeciesEvaluation method)
(mnp.species_models.species_model.SpeciesModel method)
U
update_results_dictionary() (mnp.species_models.species_evaluation.RegionalSpeciesEvaluation method)
(mnp.species_models.species_evaluation.SpeciesEvaluation method)
update_status() (mnp.preparation.io_pathways.VerificationProcedure method)
update_viability_class() (mnp.species_models.species_evaluation.SpeciesEvaluation method)
V
valid_species_subselections (mnp.config.MNPParameters attribute)
VerificationProcedure (class in mnp.preparation.io_pathways)
verify() (mnp.preparation.io_pathways.InputPathway method)
verify_local_distance() (in module mnp.preparation.input_verification_functions)
verify_parameters() (in module mnp.preparation.input_verification_functions)
verify_spatial_data_coverage() (in module mnp.preparation.verify_spatial_data_coverage)
verify_user_input() (in module mnp.preparation.io_pathways)
VerifyEnvironmentalTable (class in mnp.preparation.io_pathways)
VerifyHasEnvironmentalFactors (class in mnp.preparation.io_pathways)
VerifyHSIFromDisk (class in mnp.preparation.io_pathways)
VerifyIsGeospatialRasterAndResolution (class in mnp.preparation.io_pathways)
VerifyLandTypeDirectory (class in mnp.preparation.io_pathways)
VerifyMetadataComment (class in mnp.preparation.io_pathways)
VerifyParameters (class in mnp.preparation.io_pathways)
VerifyRasterAndGeospatialProfileBounds (class in mnp.preparation.io_pathways)
VerifyRasterBounds (class in mnp.preparation.io_pathways)
VerifySpeciesSubselection (class in mnp.preparation.io_pathways)
VerifySpeciesTraits (class in mnp.preparation.io_pathways)
VerifyTable (class in mnp.preparation.io_pathways)
viable_threshold (mnp.species_models.species_evaluation.SpeciesEvaluationParameters attribute)
W
warning() (mnp.species_models.species_geo_map.SpeciesGeomapLogger method)
write() (mnp.species_models.polygon_habitat_maps.PolygonHabitatMap method)
write_explanatory_table() (mnp.evaluation.subselection_output.AssignedSpeciesMap method)
write_to_file() (mnp.evaluation.qgis_templates.QgisLayerTemplate method)
Y
yellow (mnp.utils.CustomFormatter attribute)