`mnp.preparation.input_verification_functions`

Module Contents

`is_geospatial_raster`	Is a file a gdal compatible geospatial raster? Parameters ———- file_pathL target file path
`path_exists`
`raster_has_resolution`	Check if a raster has target resolution Parameters ———- file_path: target file path target_resolution: expected resolution of the raster
`is_directory`	Is something a directory? Parameters ———- directory_path: target directory path
`directory_contains`	Directory contains n or more files matching a glob patter Parameters ———- directory_path: target directory path patter: string pattern to match for n: minimal nr of files
`rasters_have_identical_bounds`	Verify that all rasters have identical bound Parameters ———- rasters: list with one or more paths to raster files on disk
`verify_parameters`	Verify parameters in user generated ini file comply to expectatations
`csv_is_readable`
`is_valid_csv`	Determine if a file is a valid CSV with contents and corret header Parameters ———- file_path: path to file table_type: table type to deterime required headers
`occurs_in_formula`	Check if name for environmental variable occurs in at least one species environmental variable formula.
`verify_local_distance`	Verify that all species local distances are conmensurable with 25m raster resolution Parameters ———- species_traits: path species traits table target_resolution: raster resolution

mnp.preparation.input_verification_functions.is_geospatial_raster(file_path: str): Is a file a gdal compatible geospatial raster? Parameters ———- file_pathL target file path

mnp.preparation.input_verification_functions.raster_has_resolution(file_path: str, target_resolution): Check if a raster has target resolution Parameters ———- file_path: target file path target_resolution: expected resolution of the raster

mnp.preparation.input_verification_functions.is_directory(directory_path: str): Is something a directory? Parameters ———- directory_path: target directory path

mnp.preparation.input_verification_functions.directory_contains(directory_path: str, pattern: str, n): Directory contains n or more files matching a glob patter Parameters ———- directory_path: target directory path patter: string pattern to match for n: minimal nr of files

mnp.preparation.input_verification_functions.rasters_have_identical_bounds(rasters: list): Verify that all rasters have identical bound Parameters ———- rasters: list with one or more paths to raster files on disk

mnp.preparation.input_verification_functions.verify_parameters(configuration: configparser.ConfigParser)

Verify parameters in user generated ini file comply to expectatations

configuration: output from read_ini

boolean, msg

mnp.preparation.input_verification_functions.csv_is_readable(file_path: str) → bool

mnp.preparation.input_verification_functions.is_valid_csv(file_path: str, table_type: str): Determine if a file is a valid CSV with contents and corret header Parameters ———- file_path: path to file table_type: table type to deterime required headers

mnp.preparation.input_verification_functions.occurs_in_formula(name: str, species_traits: str)

Check if name for environmental variable occurs in at least one species environmental variable formula.

mnp.preparation.input_verification_functions.verify_local_distance(species_traits: str, target_resolution: int): Verify that all species local distances are conmensurable with 25m raster resolution Parameters ———- species_traits: path species traits table target_resolution: raster resolution